STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165057GID complex subunit 8 homolog b (S. cerevisiae). (228 aa)    
Predicted Functional Partners:
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.922
ranbp10
Ran binding protein 10.
   
 
 0.851
ranbp9
Uncharacterized protein.
   
 
0.851
LOC101155246
WD repeat domain 26b.
    
 
 0.832
LOC101164206
Uncharacterized protein.
    
 
 0.832
GID4
GID complex subunit 4 homolog.
    
 
 0.821
GID4-2
GID complex subunit 4 homolog.
    
 
 0.821
maea
Macrophage erythroblast attacher.
  
 
 
 0.735
SPRYD3
SPRY domain containing 3.
   
 
 0.715
LOC101156411
SPRY domain containing 3.
   
 
 0.715
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.