STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159953G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (376 aa)    
Predicted Functional Partners:
LOC101168692
Prepronociceptin a.
   
 0.884
pomc
Proopiomelanocortin.
   
 0.881
LOC101164777
Uncharacterized protein.
   
 0.881
pdyn
Prodynorphin.
   
 
 0.876
penk
Uncharacterized protein.
    
 0.872
LOC101160779
Prepronociceptin b.
     
  0.650
gal
Galanin/GMAP prepropeptide.
    
 0.599
LOC101157910
Somatostatin.
    
 0.545
LOC101160812
Opiate receptor-like 1; Belongs to the G-protein coupled receptor 1 family.
  
  
0.510
agt
Angiotensinogen; Belongs to the serpin family.
    
  0.493
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.