Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110950033Nedd4 family interacting protein 2. (262 aa)    
Predicted Functional Partners:
nedd4
E3 ubiquitin-protein ligase.
    
 
 0.922
nedd4l
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.922
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.775
LOC110966678
WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.775
LOC110963920
E3 ubiquitin-protein ligase.
    
 
 0.762
LOC110968687
E3 ubiquitin-protein ligase.
    
 
 0.762
LOC110961583
Brain protein I3.
    
   0.752
LOC110967984
Uncharacterized protein.
    
   0.752
LOC110956979
Uncharacterized protein.
   
 
 0.749
LOC110953435
Solute carrier family 11 member 2.
   
 
 0.749
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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