STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110950022Si:dkey-76k16.6. (300 aa)    
Predicted Functional Partners:
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
   
 0.937
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.922
ccna2
Cyclin A2; Belongs to the cyclin family.
   
 0.832
ccnj
Cyclin J; Belongs to the cyclin family.
   
 0.832
LOC110969425
Cyclin J-like; Belongs to the cyclin family.
   
 0.832
ccnf
Cyclin F; Belongs to the cyclin family.
   
 0.832
ccna1
Cyclin A1; Belongs to the cyclin family.
   
 0.832
LOC110969597
Cyclin-dependent kinase 16.
   
 0.812
LOC110957520
Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily.
   
 0.812
cdk4
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
   
 0.812
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.