Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
crotCarnitine O-octanoyltransferase; Belongs to the carnitine/choline acetyltransferase family. (500 aa)    
Predicted Functional Partners:
LOC110963273
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.846
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.834
LOC110967990
Sterol carrier protein 2b.
   
 
 0.834
amacr
Alpha-methylacyl-CoA racemase.
     
 0.814
eci2
Enoyl-CoA delta isomerase 2.
   
 
 0.808
hsd17b4
Hydroxysteroid (17-beta) dehydrogenase 4.
   
 
 0.798
acot8
Acyl-CoA thioesterase 8.
     
 0.783
gnpat
Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
     
 0.778
LOC110968503
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
     
 0.778
LOC110947232
Pex2_Pex12 domain-containing protein.
     
 0.761
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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