Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mgme1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (347 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
    
   0.958
mipep
Mitochondrial intermediate peptidase.
    
   0.870
polg2
Polymerase (DNA directed), gamma 2, accessory subunit.
      
 0.774
polg
Polymerase (DNA directed), gamma.
    
 
 0.747
cunh18orf54
Uncharacterized protein.
      
 0.708
twnk
Twinkle mtDNA helicase.
      
 0.708
LOC110952312
Cytochrome c oxidase assembly factor 7.
      
 0.704
grsf1
G-rich RNA sequence binding factor 1.
    
 
 0.702
mlh3
MutL homolog 3 (E. coli).
      
 0.701
dna2
DNA replication helicase/nuclease 2.
      
 0.699
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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