Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968998Uncharacterized protein. (514 aa)    
Predicted Functional Partners:
cfap52
Cilia and flagella associated protein 52.
   
 0.924
LOC110965662
Tektin 3.
   
 
 0.874
atf7ip
Activating transcription factor 7 interacting protein.
    
 0.859
LOC110969553
Fibronectin type-III domain-containing protein.
    
 0.859
enkur
Enkurin, TRPC channel interacting protein.
   
 
 0.858
mns1
Meiosis-specific nuclear structural 1.
   
 0.858
cfap45
Cilia and flagella associated protein 45.
   
 
 0.854
cfap161
Cilia and flagella associated protein 161.
   
 
 0.849
chaf1a
Chromatin assembly factor 1, subunit A (p150).
    
 
 0.848
tekt2
Tektin 2 (testicular).
   
 
 0.847
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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