STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brat1BRCA1-associated ATM activator 1. (905 aa)    
Predicted Functional Partners:
brca1
Uncharacterized protein.
    
 
 0.900
ints9
Integrator complex subunit 9.
    
 
 0.889
ints11
Integrator complex subunit 11.
    
 
 0.880
wdr73
WD repeat domain 73.
    
 
 0.803
ENSAPOP00000011263
Uncharacterized protein.
    
   0.728
ENSAPOP00000028509
Integrator complex subunit 4.
    
   0.728
brap
BRCA1 associated protein.
      
 0.673
tonsl
Tonsoku-like, DNA repair protein.
      
 0.660
LOC110948645
BRCA1 associated RING domain 1.
    
 
 0.626
mysm1
Myb-like, SWIRM and MPN domains 1.
   
   0.622
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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