ttc3 protein (Acanthochromis polyacanthus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ttc3

Uncharacterized protein. (1542 aa)

Predicted Functional Partners:

ubxn7

0.741

nrde2

0.627

rps27a

0.617

LOC110966765

0.588

LOC110947201

0.588

uba52

0.588

sec63

0.558

mindy3

0.553

lgr4

0.504

LGR5

0.504

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LGR5	LOC110947201	ENSAPOP00000005883	ENSAPOP00000026534	Leucine rich repeat containing G protein-coupled receptor 5.	Ubiquitin-like.	0.527
LGR5	LOC110966765	ENSAPOP00000005883	ENSAPOP00000014852	Leucine rich repeat containing G protein-coupled receptor 5.	Ubiquitin-like domain-containing protein.	0.527
LGR5	lgr4	ENSAPOP00000005883	ENSAPOP00000000842	Leucine rich repeat containing G protein-coupled receptor 5.	Leucine-rich repeat containing G protein-coupled receptor 4.	0.897
LGR5	rps27a	ENSAPOP00000005883	ENSAPOP00000019340	Leucine rich repeat containing G protein-coupled receptor 5.	Ribosomal protein S27a.	0.668
LGR5	ttc3	ENSAPOP00000005883	ENSAPOP00000001008	Leucine rich repeat containing G protein-coupled receptor 5.	Uncharacterized protein.	0.504
LGR5	uba52	ENSAPOP00000005883	ENSAPOP00000026882	Leucine rich repeat containing G protein-coupled receptor 5.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.635
LOC110947201	LGR5	ENSAPOP00000026534	ENSAPOP00000005883	Ubiquitin-like.	Leucine rich repeat containing G protein-coupled receptor 5.	0.527
LOC110947201	lgr4	ENSAPOP00000026534	ENSAPOP00000000842	Ubiquitin-like.	Leucine-rich repeat containing G protein-coupled receptor 4.	0.527
LOC110947201	rps27a	ENSAPOP00000026534	ENSAPOP00000019340	Ubiquitin-like.	Ribosomal protein S27a.	0.991
LOC110947201	ttc3	ENSAPOP00000026534	ENSAPOP00000001008	Ubiquitin-like.	Uncharacterized protein.	0.588
LOC110947201	ubxn7	ENSAPOP00000026534	ENSAPOP00000032978	Ubiquitin-like.	UBX domain-containing protein 7.	0.879
LOC110966765	LGR5	ENSAPOP00000014852	ENSAPOP00000005883	Ubiquitin-like domain-containing protein.	Leucine rich repeat containing G protein-coupled receptor 5.	0.527
LOC110966765	lgr4	ENSAPOP00000014852	ENSAPOP00000000842	Ubiquitin-like domain-containing protein.	Leucine-rich repeat containing G protein-coupled receptor 4.	0.527
LOC110966765	rps27a	ENSAPOP00000014852	ENSAPOP00000019340	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.994
LOC110966765	ttc3	ENSAPOP00000014852	ENSAPOP00000001008	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.588
LOC110966765	uba52	ENSAPOP00000014852	ENSAPOP00000026882	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.924
LOC110966765	ubxn7	ENSAPOP00000014852	ENSAPOP00000032978	Ubiquitin-like domain-containing protein.	UBX domain-containing protein 7.	0.879
lgr4	LGR5	ENSAPOP00000000842	ENSAPOP00000005883	Leucine-rich repeat containing G protein-coupled receptor 4.	Leucine rich repeat containing G protein-coupled receptor 5.	0.897
lgr4	LOC110947201	ENSAPOP00000000842	ENSAPOP00000026534	Leucine-rich repeat containing G protein-coupled receptor 4.	Ubiquitin-like.	0.527
lgr4	LOC110966765	ENSAPOP00000000842	ENSAPOP00000014852	Leucine-rich repeat containing G protein-coupled receptor 4.	Ubiquitin-like domain-containing protein.	0.527