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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970838Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (647 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.834
LOC110965797
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.834
rnf7
Ring finger protein 7.
    
 0.796
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.795
commd8
COMM domain containing 8.
   
  0.728
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.714
LOC110948732
COMM domain containing 4.
    
 0.694
LOC110955684
Ubiquitin-like domain-containing protein.
    
  0.681
LOC110953269
NEDD8 ubiquitin like modifier.
    
  0.681
commd9
COMM domain containing 9.
    
  0.676
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.