Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970838Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (647 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.896
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.890
LOC110965797
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.890
rnf7
Ring finger protein 7.
    
 0.854
LOC110951859
Elongin B.
    
 0.814
ELOB
Elongin B.
    
 0.814
ENSAPOP00000003675
Ubiquitin-like domain-containing protein.
    
  0.670
pc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
 0.663
traf7
TNF receptor-associated factor 7.
    
 0.658
fbxw4
F-box and WD repeat domain containing 4.
     
 0.654
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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