STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh5orf49Si:dkeyp-46h3.1. (137 aa)    
Predicted Functional Partners:
fam183a
Family with sequence similarity 183 member A.
   
 
 0.981
efcab1
EF-hand calcium binding domain 1.
    
 
 0.966
LOC110972665
IQ motif and ubiquitin domain containing.
    
 
 0.950
cfap126
Uncharacterized protein.
   
 
 0.948
ccdc96
DUF4201 domain-containing protein.
    
 
 0.942
cfap161
Cilia and flagella associated protein 161.
   
 
 0.930
ccdc40
Coiled-coil domain containing 40.
    
 
 0.920
armc3
Armadillo repeat containing 3.
   
 
 0.916
armc4
Armadillo repeat containing 4.
   
 
 0.910
cfap52
Cilia and flagella associated protein 52.
   
   0.903
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.