Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
pus10Pseudouridine synthase 10. (534 aa)    
Predicted Functional Partners:
abitram
Actin binding transcription modulator.
    
   0.956
trmt5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
  
 0.810
pus7l
Pseudouridine synthase 7 like.
   
  
 0.801
pus7
Pseudouridine synthase 7.
   
  
 0.800
pus1
Pseudouridine synthase 1.
   
  
 0.764
trmt12
tRNA methyltransferase 12 homolog.
   
  
 0.740
ENSAPOP00000007888
Cardiolipin synthase 1.
     
  0.724
mboat7
Membrane bound O-acyltransferase domain containing 7; Belongs to the membrane-bound acyltransferase family.
     
  0.724
taz
Tafazzin family protein; Belongs to the taffazin family.
     
  0.724
dkc1
Dyskeratosis congenita 1, dyskerin.
   
  
 0.713
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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