STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968908Tetraspanin. (260 aa)    
Predicted Functional Partners:
ENSAPOP00000025352
Uncharacterized protein.
      
 0.659
LOC110948795
Zgc:165604.
      
 0.648
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.641
mst1r
Macrophage stimulating 1 receptor b.
    
  0.641
LOC110972771
Uncharacterized protein.
    
  0.641
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.538
LOC110951037
Insulin-like growth factor 2b.
     
 0.498
ENSAPOP00000003678
Uncharacterized protein.
      
 0.490
siva1
Apoptosis regulatory protein Siva; Induces CD27-mediated apoptosis. Inhibits BCL2L1 isoform Bcl- x(L) anti-apoptotic activity. Inhibits activation of NF-kappa-B and promotes T-cell receptor-mediated apoptosis.
      
 0.453
LOC110970708
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
    
  0.430
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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