Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phox2aPaired like homeobox 2A. (301 aa)    
Predicted Functional Partners:
phox2b
Paired like homeobox 2Bb.
   
 
 0.935
barx2
BARX homeobox 2.
    
 
 0.695
hand2
Heart and neural crest derivatives expressed 2.
   
 
 0.691
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.673
kif21a
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.673
LOC110962917
Uncharacterized protein.
      
 0.657
prr16
Proline rich 16.
      
 0.646
ENSAPOP00000019999
Achaete-scute family bHLH transcription factor 1b.
   
 
 0.587
ascl1
Achaete-scute family bHLH transcription factor 1a.
   
 
 0.584
LOC110951760
Monooxygenase, DBH-like 1, like.
   
 
 0.583
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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