Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
postnPeriostin, osteoblast specific factor a. (880 aa)    
Predicted Functional Partners:
lum
Lumican.
   
  
 0.780
col6a1
Collagen, type VI, alpha 1.
   
 
 0.737
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
    
 
 0.730
LOC110947875
Dachsous cadherin-related 1a.
      
 0.679
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.679
LOC110972183
TPR_REGION domain-containing protein.
   
  
 0.679
prrx1
Paired related homeobox 1a.
   
  
 0.675
atoh8
BHLH domain-containing protein.
      
 0.646
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 
 0.625
pts
6-pyruvoyltetrahydropterin synthase.
     
  0.607
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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