STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110956464Cyclic nucleotide gated channel subunit alpha 3a. (656 aa)    
Predicted Functional Partners:
LOC110961396
Si:dkey-44k1.5.
  
0.889
ENSAPOP00000029364
Cyclic nucleotide gated channel beta 1a.
   
0.884
ENSAPOP00000031010
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.829
LOC110970207
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.828
CALML6
Calmodulin like 6.
     
 0.822
LOC110962279
Cyclic nucleotide gated channel subunit alpha 1a.
  
 
 
0.816
calml4
Calmodulin-like 4a.
     
 0.813
guca1b
Guanylate cyclase activator 1B.
   
 
 0.581
exoc4
Exocyst complex component 4.
     
 0.574
LOC110962298
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
     
 0.556
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.