Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110956464Cyclic nucleotide gated channel subunit alpha 3a. (656 aa)    
Predicted Functional Partners:
LOC110961396
Si:dkey-44k1.5.
  
0.954
ENSAPOP00000029364
Cyclic nucleotide gated channel beta 1a.
   
0.952
LOC110962279
Cyclic nucleotide gated channel subunit alpha 1a.
  
 
 
0.932
ENSAPOP00000031010
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.911
LOC110970207
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.910
CALML6
Calmodulin like 6.
    
 0.884
calml4
Calmodulin-like 4a.
    
 0.881
LOC110962298
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.818
calm1
Calmodulin 1.
    
 0.818
calm3
Calmodulin 3.
    
 0.818
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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