STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAP1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1. (1181 aa)    
Predicted Functional Partners:
LOC110956988
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
0.843
LOC110952890
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
   
0.837
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
0.763
LOC110967393
Un-named sa1614.
   
0.754
asap1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b.
   
0.754
LOC110946495
Uncharacterized protein.
    
 0.686
LOC110955806
Uncharacterized protein.
    
 0.686
LOC110956405
Uncharacterized protein.
    
 0.686
LOC110958078
Ras homolog family member Ca.
    
 0.671
LOC110964518
Uncharacterized protein.
    
 0.671
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.