Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARAP1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1. (1181 aa)    
Predicted Functional Partners:
LOC110952890
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
   
 0.795
grb2
Growth factor receptor-bound protein 2b.
    
 
 0.779
LOC110946495
Uncharacterized protein.
    
 0.759
LOC110955806
Uncharacterized protein.
    
 0.759
LOC110956405
Uncharacterized protein.
    
 0.759
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
 0.757
LOC110956988
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
 0.757
agap3
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
     
 0.757
LOC110965646
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
     
 0.757
LOC110958078
Ras homolog family member Ca.
    
 0.733
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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