Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110947118Ring finger protein 167. (401 aa)    
Predicted Functional Partners:
ap3d1
AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.
    
   0.793
cd63
Tetraspanin.
   
 
 0.778
otub1
Ubiquitin thioesterase.
    
 0.656
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.638
tmem183a
Transmembrane protein 183A.
      
 0.630
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.627
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
    
 
 0.620
arpin
Actin related protein 2/3 complex inhibitor.
    
 
 0.620
AP3S2
Adaptor related protein complex 3 subunit sigma 2.
    
 
 0.620
LOC110963171
Ubiquitin-conjugating enzyme E2D 1b; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.614
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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