Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mctp1Multiple C2 domains, transmembrane 1a. (922 aa)    
Predicted Functional Partners:
ENSAPOP00000030863
Intersectin 2a.
     
 0.648
LOC110950796
Intersectin 2b.
     
 0.648
nubpl
Nucleotide binding protein-like.
      
 0.501
itsn1
Intersectin 1 (SH3 domain protein).
     
  0.496
nub1
Negative regulator of ubiquitin-like proteins 1.
      
 0.475
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
      
 0.418
cmc2
COX assembly mitochondrial protein.
      
 0.416
PRDM15
PR/SET domain 15.
      
 0.416
tmem182
Transmembrane protein 182a.
      
 0.412
ift81
Intraflagellar transport 81 homolog.
      
 0.404
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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