Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ufm1Ubiquitin-fold modifier 1. (78 aa)    
Predicted Functional Partners:
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
   
 
 0.997
uba5
Ubiquitin-like modifier activating enzyme 5.
    
 
 0.996
ufsp2
Ufm1-specific peptidase 2.
    
 
 0.980
DDRGK1
DDRGK domain containing 1.
    
 
 0.979
cdk5rap3
CDK5 regulatory subunit associated protein 3.
    
 
 0.973
ufl1
UFM1-specific ligase 1.
   
 
 0.969
ufsp1
UFM1-specific peptidase 1 (non-functional).
  
 
 
 0.948
suox
Sulfite oxidase.
     
  0.873
TMED6
Transmembrane p24 trafficking protein 6.
   
  
 0.819
mocs3
Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]
    
 
 0.800
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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