STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
orc5Origin recognition complex, subunit 5. (427 aa)    
Predicted Functional Partners:
orc2
Origin recognition complex, subunit 2.
   
 0.999
orc3
Origin recognition complex, subunit 3.
   
 0.999
orc4
Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
   
 0.999
mcm5
DNA helicase; Belongs to the MCM family.
   
 0.999
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.999
cdt1
Chromatin licensing and DNA replication factor 1.
   
 0.998
mcm2
DNA helicase; Belongs to the MCM family.
   
 0.998
mcm6
DNA helicase; Belongs to the MCM family.
   
 0.997
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 0.996
lrwd1
Leucine-rich repeats and WD repeat domain containing 1.
    
 0.995
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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