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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970205Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (556 aa)    
Predicted Functional Partners:
LOC110968954
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.556
LOC110951532
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.556
prodh2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.556
LOC110955902
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
     
 0.513
LOC110962201
Solute carrier family 44 member 5b; Belongs to the CTL (choline transporter-like) family.
     
 0.513
LOC110952757
Zgc:63569; Belongs to the CTL (choline transporter-like) family.
     
 0.513
LOC110958593
Solute carrier family 44 member 2; Belongs to the CTL (choline transporter-like) family.
     
 0.513
LOC110965364
Solute carrier family 44 member 5a; Belongs to the CTL (choline transporter-like) family.
     
 0.513
SLC44A1
Solute carrier family 44 member 1; Belongs to the CTL (choline transporter-like) family.
     
 0.513
slc44a4
Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family.
     
 0.513
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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