Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110953594UDENN domain-containing protein. (1084 aa)    
Predicted Functional Partners:
rab35
RAB35, member RAS oncogene family b.
    
 0.684
LOC110955130
Si:dkey-16l2.16.
    
 0.684
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 0.684
LOC110964817
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.544
ENSAPOP00000030863
Intersectin 2a.
    
 
 0.517
LOC110950796
Intersectin 2b.
    
 
 0.517
suox
Sulfite oxidase.
      
 0.505
ENSAPOP00000004017
Uncharacterized protein.
     
 0.499
RAB9A
RAB9A, member RAS oncogene family.
     
 0.499
ENSAPOP00000024659
RAB9B, member RAS oncogene family.
     
 0.499
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (20%) [HD]