Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
frem2FRAS1 related extracellular matrix 2a. (3125 aa)    
Predicted Functional Partners:
ENSAPOP00000009286
Uncharacterized protein.
 
 
 0.911
frem1
Fras1 related extracellular matrix 1a.
   
 0.897
ENSAPOP00000019165
Fras1 related extracellular matrix 1b.
   
 0.890
npnt
Nephronectin a.
    
  0.885
LOC110954669
Integrin beta; Belongs to the integrin beta chain family.
    
  0.884
LOC110951090
Integrin beta; Belongs to the integrin beta chain family.
    
  0.884
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
  0.880
LOC110947872
FRAS1 related extracellular matrix 2b.
     
  0.873
ENSAPOP00000012755
Uncharacterized protein.
     
  0.870
LOC110962032
Fras1 related extracellular matrix 3.
     
  0.868
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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