Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
cdpf1C6_DPF domain-containing protein. (116 aa)    
Predicted Functional Partners:
atxn10
Ataxin 10.
      
 0.691
dnlz
DNL-type domain-containing protein.
      
 0.657
wdr89
WD repeat domain 89.
      
 0.574
psmd9
Proteasome 26S subunit, non-ATPase 9.
      
 0.527
prorp
Protein only RNase P catalytic subunit.
      
 0.492
lmln
Leishmanolysin-like peptidase.
      
 0.491
WDR77
WD repeat domain 77.
      
 0.401
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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