STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964147Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
ENSAPOP00000005366
Uncharacterized protein.
   
 0.920
ENSAPOP00000032686
Cadherin-related 23.
   
0.920
lhfpl5
LHFPL tetraspan subfamily member 5b.
   
 0.705
LOC110952778
Uncharacterized protein.
   
 0.705
ENSAPOP00000013805
LHFPL tetraspan subfamily member 5a.
   
 0.705
lhfpl3
LHFPL tetraspan subfamily member 3.
   
 0.705
LOC110950917
LHFPL tetraspan subfamily member 4a.
   
 0.705
LOC110969130
Uncharacterized protein.
   
 0.705
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.701
fjx1
Four-jointed box kinase 1.
   
 0.700
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.