Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964147Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
ENSAPOP00000005366
Uncharacterized protein.
   
 0.936
ENSAPOP00000032686
Cadherin-related 23.
   
 0.936
ush1c
Usher syndrome 1C.
   
 
 0.914
LOC110949986
Uncharacterized protein.
    
 0.803
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.803
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.803
LOC110971548
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
0.801
ENSAPOP00000004799
Uncharacterized protein.
   
0.801
cdh11
Cadherin 11, type 2, OB-cadherin (osteoblast); Cadherins are calcium-dependent cell adhesion proteins.
   
0.801
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
0.801
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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