Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cd8aIg-like domain-containing protein. (203 aa)    
Predicted Functional Partners:
LOC110968430
Uncharacterized protein.
   
 0.984
ENSAPOP00000012901
Uncharacterized protein.
   
 
 0.983
LOC110969645
IGv domain-containing protein.
   
 
 0.974
ENSAPOP00000009444
Uncharacterized protein.
    
 0.957
ENSAPOP00000010676
MHC_I-like_Ag-recog domain-containing protein; Belongs to the MHC class I family.
    
 0.957
LOC110972042
MHC_I-like_Ag-recog domain-containing protein; Belongs to the MHC class I family.
    
 0.957
LOC110966449
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.954
LOC110963374
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.954
rpa2
Replication protein A2.
   
 0.954
LOC110946920
Uncharacterized protein.
   
 
 0.951
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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