STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001186WD_REPEATS_REGION domain-containing protein. (422 aa)    
Predicted Functional Partners:
wdfy3
WD repeat and FYVE domain containing 3.
 
     0.878
ENSAPOP00000013113
Uncharacterized protein.
     
 0.788
sqstm1
Sequestosome 1.
   
 
 0.771
plekhg7
Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.
    
 0.749
ENSAPOP00000011091
Uncharacterized protein.
 
    
 0.728
rack1
Receptor for activated C kinase 1.
    
 0.702
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.691
gabarap
GABA(A) receptor-associated protein b.
    
 
 0.691
LOC110966675
GABA(A) receptor-associated protein like 2.
    
 
 0.691
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
     
 0.669
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.