STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001207Cadherin, EGF LAG seven-pass G-type receptor 3. (812 aa)    
Predicted Functional Partners:
LOC110961713
Cadherin, EGF LAG seven-pass G-type receptor 3; Belongs to the G-protein coupled receptor 2 family.
 
     0.843
LOC110967643
Uncharacterized protein.
 
 
 0.627
ENSAPOP00000008969
Uncharacterized protein.
 
 
 0.626
LOC110967503
Vang-like protein.
    
 0.596
vangl2
Vang-like protein.
    
 0.596
VANGL1
Vang-like protein.
    
 0.590
LOC110956452
Vang-like protein.
    
 0.558
prickle2
Prickle homolog 2b.
   
 0.538
PRICKLE1
Prickle homolog 1a.
   
 0.501
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
 
   
  0.489
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: medium (42%) [HD]