Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
pdxdc1Pyridoxal-dependent decarboxylase domain containing 1. (801 aa)    
Predicted Functional Partners:
LOC110968415
PPP1R35_C domain-containing protein.
      
 0.835
NTAN1
N-terminal asparagine amidase.
      
 0.727
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.706
ENSAPOP00000029604
Uncharacterized protein.
      
 0.694
cunhxorf56
Zgc:103697.
      
 0.687
pagr1
PAXIP1 associated glutamate-rich protein 1.
      
 0.676
ccdc6
Coiled-coil domain containing 6a.
      
 0.660
hsbp1
Heat shock factor binding protein 1a.
      
 0.657
LOC110951389
BAH domain-containing protein.
      
 0.656
bahd1
Bromo adjacent homology domain containing 1.
      
 0.656
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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