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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxdc1Pyridoxal-dependent decarboxylase domain containing 1. (801 aa)    
Predicted Functional Partners:
hsbp1
Heat shock factor binding protein 1a.
      
 0.538
LOC110968415
PPP1R35_C domain-containing protein.
      
 0.522
pagr1
PAXIP1 associated glutamate-rich protein 1.
      
 0.514
NTAN1
N-terminal asparagine amidase.
      
 0.514
ccdc6
Coiled-coil domain containing 6a.
      
 0.503
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.502
ENSAPOP00000029604
Uncharacterized protein.
      
 0.489
carhsp1
Calcium regulated heat stable protein 1.
      
 0.480
ENSAPOP00000001299
Uncharacterized protein.
      
 0.475
ciao1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
      
 0.467
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.