STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxnThioredoxin domain-containing protein. (418 aa)    
Predicted Functional Partners:
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.512
LOC110966740
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.504
LOC110955681
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.504
LYPD6
LY6/PLAUR domain containing 6.
      
 0.489
ccdc92
Coiled-coil domain containing 92.
      
 0.473
LOC110970083
Uncharacterized protein.
    
 
 0.467
ENSAPOP00000004210
DIX domain-containing protein.
    
 
 0.467
dvl1
Dishevelled segment polarity protein 1a.
    
 
 0.467
dvl3
Dishevelled segment polarity protein 3a.
    
 
 0.467
dvl2
Dishevelled segment polarity protein 2.
    
 
 0.467
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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