Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSAPOP00000001229Solute carrier family 6 member 17. (341 aa)    
Predicted Functional Partners:
LOC110966120
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.672
ENSAPOP00000016521
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.668
LOC110969744
Protein kinase domain-containing protein.
     
  0.646
stx1a
Syntaxin 1A (brain); Belongs to the syntaxin family.
    
 0.601
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.601
LOC110950537
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.590
LOC110951460
Syntaxin 4; Belongs to the syntaxin family.
    
 0.590
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.590
LOC110968688
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.590
LOC110948379
Protein kinase domain-containing protein.
     
  0.508
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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