Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964140Si:ch211-146m13.3. (871 aa)    
Predicted Functional Partners:
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.766
ENSAPOP00000032746
Uncharacterized protein.
    
 0.725
ENSAPOP00000032748
WD_REPEATS_REGION domain-containing protein.
    
 0.725
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.697
rabgef1
Uncharacterized protein.
   
 0.650
LOC110952718
Uncharacterized protein.
   
 0.650
LOC110960074
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.650
ccdc65
NYD-SP28 domain-containing protein.
   
 
 0.601
cfap43
Cilia and flagella associated protein 43.
    
 
 0.586
zmynd12
MYND-type domain-containing protein.
   
   0.585
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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