Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOGNoggin; Belongs to the noggin family. (208 aa)    
Predicted Functional Partners:
LOC110966857
Growth differentiation factor 5.
    
 0.978
ENSAPOP00000026769
Bone morphogenetic protein 4.
    
 0.978
bmp2
Bone morphogenetic protein 2b.
    
 0.970
LOC110970646
Bone morphogenetic protein 16.
    
 0.970
LOC110957396
Bone morphogenetic protein 7b.
    
 0.962
bmp6
Bone morphogenetic protein 6.
    
 0.962
bmp5
Bone morphogenetic protein 5.
    
 0.961
LOC110970242
Bone morphogenetic protein 7a.
    
 0.944
gdf6
Growth differentiation factor 6a.
    
 0.929
LOC110953662
Bone morphogenetic protein 8a.
    
 0.893
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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