STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem220Transmembrane protein 220. (162 aa)    
Predicted Functional Partners:
LOC110955941
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
    
   0.724
LOC110956517
Uncharacterized protein.
    
   0.724
LOC110964033
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
    
   0.724
adprm
ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent.
      
 0.689
ENSAPOP00000033018
Uncharacterized protein.
      
 0.619
lrtm1
Leucine rich repeats and transmembrane domains 1.
      
 0.538
trir
Telomerase RNA component interacting RNase.
    
   0.513
LOC110945790
Uncharacterized protein.
      
 0.470
LOC110945783
Uncharacterized protein.
      
 0.470
ssr2
Signal sequence receptor, beta.
      
 0.420
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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