Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tmem175Transmembrane protein 175. (520 aa)    
Predicted Functional Partners:
lamp1
Lysosomal associated membrane protein 1a.
    
 
 0.889
LOC110956951
Lysosomal associated membrane protein 1b.
    
 
 0.793
atp13a2
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.725
DGKQ
Diacylglycerol kinase.
      
 0.700
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
      
 0.677
ENSAPOP00000033369
Uncharacterized protein.
      
 0.655
PCGF3
Polycomb group ring finger 3.
      
 0.647
DDRGK1
DDRGK domain containing 1.
      
 0.537
zswim7
Zinc finger, SWIM-type containing 7.
      
 0.535
tmem230
Transmembrane protein 230b.
      
 0.528
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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