STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110955274Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
hexb
Beta-hexosaminidase.
   
 0.904
naga
Alpha-galactosidase.
   
 0.849
gla
Alpha-galactosidase.
   
 0.842
hexa
Beta-hexosaminidase.
   
 0.841
LOC110964521
Uncharacterized protein.
  
  
 
0.833
ENSAPOP00000019165
Fras1 related extracellular matrix 1b.
    
 0.831
frem1
Fras1 related extracellular matrix 1a.
    
 0.831
fam149b1
Family with sequence similarity 149 member B1.
   
 0.830
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
  
 0.774
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
  
 0.774
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.