Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110955291GATA binding protein 2a. (462 aa)    
Predicted Functional Partners:
tbx21
T-box transcription factor 21.
    
 0.966
spi1
Spi-1 proto-oncogene b.
    
 0.934
LOC110966987
Zinc finger protein, FOG family member 1.
    
 0.928
LOC110963107
Runt-related transcription factor.
    
 0.885
LOC110951745
T-cell acute lymphocytic leukemia 1.
   
 0.877
ENSAPOP00000031147
BHLH domain-containing protein.
   
 0.877
ENSAPOP00000006685
Glutaredoxin 3.
    
 
 0.874
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.862
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.808
srf
MADS-box domain-containing protein.
    
 0.805
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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