LOC110968013 protein (Acanthochromis polyacanthus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110968013

Uncharacterized protein. (942 aa)

Predicted Functional Partners:

LOC110965614

0.792

gng7

0.691

LOC110969265

0.691

LOC110963827

0.691

ENSAPOP00000030863

0.605

LOC110950796

0.605

itsn1

0.573

ENSAPOP00000005758

0.568

CDC42

0.568

LOC110966235

0.568

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSAPOP00000005758	ENSAPOP00000007597	ENSAPOP00000005758	Cell division cycle 42.	Ras homolog gene family, member Gd.	0.661
CDC42	ENSAPOP00000030863	ENSAPOP00000007597	ENSAPOP00000030863	Cell division cycle 42.	Intersectin 2a.	0.910
CDC42	LOC110950796	ENSAPOP00000007597	ENSAPOP00000032790	Cell division cycle 42.	Intersectin 2b.	0.910
CDC42	LOC110963827	ENSAPOP00000007597	ENSAPOP00000029051	Cell division cycle 42.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.509
CDC42	LOC110965614	ENSAPOP00000007597	ENSAPOP00000029273	Cell division cycle 42.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.671
CDC42	LOC110966235	ENSAPOP00000007597	ENSAPOP00000011112	Cell division cycle 42.	Cell division cycle 42, like.	0.846
CDC42	LOC110968013	ENSAPOP00000007597	ENSAPOP00000001270	Cell division cycle 42.	Uncharacterized protein.	0.568
CDC42	LOC110969265	ENSAPOP00000007597	ENSAPOP00000012989	Cell division cycle 42.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.509
CDC42	gng7	ENSAPOP00000007597	ENSAPOP00000000290	Cell division cycle 42.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.509
CDC42	itsn1	ENSAPOP00000007597	ENSAPOP00000033115	Cell division cycle 42.	Intersectin 1 (SH3 domain protein).	0.904
ENSAPOP00000005758	CDC42	ENSAPOP00000005758	ENSAPOP00000007597	Ras homolog gene family, member Gd.	Cell division cycle 42.	0.661
ENSAPOP00000005758	ENSAPOP00000030863	ENSAPOP00000005758	ENSAPOP00000030863	Ras homolog gene family, member Gd.	Intersectin 2a.	0.903
ENSAPOP00000005758	LOC110950796	ENSAPOP00000005758	ENSAPOP00000032790	Ras homolog gene family, member Gd.	Intersectin 2b.	0.903
ENSAPOP00000005758	LOC110963827	ENSAPOP00000005758	ENSAPOP00000029051	Ras homolog gene family, member Gd.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.497
ENSAPOP00000005758	LOC110965614	ENSAPOP00000005758	ENSAPOP00000029273	Ras homolog gene family, member Gd.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.671
ENSAPOP00000005758	LOC110966235	ENSAPOP00000005758	ENSAPOP00000011112	Ras homolog gene family, member Gd.	Cell division cycle 42, like.	0.621
ENSAPOP00000005758	LOC110968013	ENSAPOP00000005758	ENSAPOP00000001270	Ras homolog gene family, member Gd.	Uncharacterized protein.	0.568
ENSAPOP00000005758	LOC110969265	ENSAPOP00000005758	ENSAPOP00000012989	Ras homolog gene family, member Gd.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.497
ENSAPOP00000005758	gng7	ENSAPOP00000005758	ENSAPOP00000000290	Ras homolog gene family, member Gd.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.497
ENSAPOP00000005758	itsn1	ENSAPOP00000005758	ENSAPOP00000033115	Ras homolog gene family, member Gd.	Intersectin 1 (SH3 domain protein).	0.844