Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110950591Zgc:163014. (324 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.821
LOC110967990
Sterol carrier protein 2b.
   
 0.821
pum2
Pumilio RNA-binding family member 2.
   
   0.816
ENSAPOP00000013017
Uncharacterized protein.
   
   0.816
pum1
Pumilio RNA-binding family member 1.
   
   0.816
rps27a
Ribosomal protein S27a.
   
 0.785
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.764
LOC110966765
Ubiquitin-like domain-containing protein.
   
 0.737
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.737
LOC110947201
Ubiquitin-like.
   
 0.737
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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