STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa0100Si:ch211-259g3.4. (2068 aa)    
Predicted Functional Partners:
pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 
  0.702
pold1
DNA polymerase.
     
  0.699
mrps27
Mitochondrial ribosomal protein S27.
    
  0.687
mtif2
Mitochondrial translational initiation factor 2.
   
 0.676
LOC110956867
Phospholipase A2, group XV.
    
   0.636
LOC110956866
Lecithin-cholesterol acyltransferase.
    
   0.636
lpcat2
Lysophosphatidylcholine acyltransferase 2.
      
 0.635
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
     
  0.614
LOC110946883
CBFD_NFYB_HMF domain-containing protein.
     
  0.614
rnf32
Ring finger protein 32.
    
 
 0.606
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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