STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhobtb3Si:dkey-6b12.5. (619 aa)    
Predicted Functional Partners:
LOC110960410
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.973
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.973
ENSAPOP00000030863
Intersectin 2a.
    
 0.903
LOC110950796
Intersectin 2b.
    
 0.903
ENSAPOP00000024610
Uncharacterized protein.
    
 0.869
ENSAPOP00000028898
Uncharacterized protein.
    
 0.869
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.862
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.844
ENSAPOP00000021769
RAB12, member RAS oncogene family.
   
 0.791
LOC110958715
Trio Rho guanine nucleotide exchange factor a.
    
 0.780
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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