STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968892Zinc finger protein 687b. (1433 aa)    
Predicted Functional Partners:
ints3
Integrator complex subunit 3.
   
   0.853
ints5
Integrator complex subunit 5.
   
   0.852
ints1
Integrator complex subunit 1.
    
   0.850
ENSAPOP00000024610
Uncharacterized protein.
    
  0.681
ENSAPOP00000028898
Uncharacterized protein.
    
  0.681
LOC110948645
BRCA1 associated RING domain 1.
    
  0.631
ENSAPOP00000006159
Uncharacterized protein.
    
  0.628
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.611
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.589
YTHDC2
YTH domain containing 2.
    
  0.584
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.