Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968892Zinc finger protein 687b. (1433 aa)    
Predicted Functional Partners:
LOC110948296
Protein kinase C binding protein 1, like.
   
 
 0.843
LOC110955075
Zinc finger, MYND-type containing 8.
   
 
 0.843
ints3
Integrator complex subunit 3.
   
   0.818
ints1
Integrator complex subunit 1.
   
   0.818
ints5
Integrator complex subunit 5.
   
   0.817
LOC110945988
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.805
UBE2O
Ubiquitin conjugating enzyme E2 O.
   
  0.799
znf592
Uncharacterized protein.
   
 
 0.796
ENSAPOP00000024610
Uncharacterized protein.
    
  0.698
ENSAPOP00000028898
Uncharacterized protein.
    
  0.698
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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