Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110962929Filamin A interacting protein 1b. (1197 aa)    
Predicted Functional Partners:
LOC110970219
Malate synthase-like.
   
 
 0.850
nbr1
NBR1 autophagy cargo receptor a.
    
 0.783
ENSAPOP00000011091
Uncharacterized protein.
    
  0.721
ENSAPOP00000028483
WDFY family member 4.
    
  0.721
CLDN20-2
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.663
ahdc1
AT hook, DNA binding motif, containing 1.
      
 0.647
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.645
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.643
LOC110971861
MOB family member 4, phocein.
    
   0.589
LOC110966162
Uncharacterized protein.
    
   0.584
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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