STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948314Iroquois homeobox 7. (323 aa)    
Predicted Functional Partners:
barhl2
BarH-like homeobox 2.
    
 
 0.613
LOC110965654
Teashirt zinc finger homeobox 1.
    
 0.600
LOC110948203
Teashirt zinc finger homeobox 3a.
    
 0.565
LOC110960460
Teashirt zinc finger homeobox 3b.
    
 0.565
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.551
tshz2
Teashirt zinc finger homeobox 2.
    
 0.551
LOC110963556
Crystallin, gamma N1; Belongs to the beta/gamma-crystallin family.
    
 
 0.546
crygn
Crystallin, gamma N2; Belongs to the beta/gamma-crystallin family.
    
 
 0.546
LOC110956478
LIM homeobox 5.
    
 
 0.524
LOC110948065
Homeobox domain-containing protein.
    
 0.521
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.