Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001370CDC42 effector protein (Rho GTPase binding) 1b. (276 aa)    
Predicted Functional Partners:
ENSAPOP00000005758
Ras homolog gene family, member Gd.
    
  0.658
LOC110965833
Ras homolog family member Gb.
    
  0.658
ENSAPOP00000024705
Ras homolog family member H.
    
 0.656
rhoq
Ras homolog family member Q.
    
 0.656
LOC110969864
Rac family small GTPase 2.
    
  0.622
LOC110956736
Uncharacterized protein.
    
  0.622
LOC110966599
Rac family small GTPase 3b.
    
  0.622
RAC1
Rac family small GTPase 1.
    
  0.622
baiap2l1
BAI1-associated protein 2-like 1a.
     
 0.604
LOC110970351
BAI1-associated protein 2-like 1b.
     
 0.604
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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