STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alas15-aminolevulinate synthase. (622 aa)    
Predicted Functional Partners:
alad
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.959
fech
Ferrochelatase; Belongs to the ferrochelatase family.
  
 
 0.920
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.915
sardh
Sarcosine dehydrogenase.
  
 
 0.911
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.898
ENSAPOP00000016870
SHMT domain-containing protein.
  
 
 0.897
shmt2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.897
gatm
Glycine amidinotransferase (L-arginine:glycine amidinotransferase).
     
 0.896
LOC110948387
Threonine aldolase 1.
  
 
 0.894
dao
D-amino-acid oxidase, tandem duplicate 2.
    
 0.892
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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