Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kdm5aLysine (K)-specific demethylase 5A. (1745 aa)    
Predicted Functional Partners:
atp5f1c
ATP synthase subunit gamma.
  
 0.940
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.940
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.904
LOC110959955
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.904
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.850
atp5f1d
ATP synthase F1 subunit delta.
  
 0.847
ENSAPOP00000004892
ATP-synt_DE_N domain-containing protein.
  
 0.847
ENSAPOP00000024272
annotation not available
  
 0.847
ATP5F1D
ATP synthase F1 subunit delta.
  
 0.847
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.838
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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