STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO6Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (955 aa)    
Predicted Functional Partners:
dab2
DAB adaptor protein 2.
    
 0.970
cltb
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.888
clta
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.888
rps27a
Ribosomal protein S27a.
    
   0.887
gipc3
GIPC PDZ domain containing family, member 3.
    
 
 0.869
gipc1
GIPC PDZ domain containing family, member 1.
    
 
 0.869
LOC110964490
GIPC PDZ domain containing family, member 2.
    
 
 0.869
LOC110965511
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.865
PAK3
Non-specific serine/threonine protein kinase.
    
  0.865
ENSAPOP00000003675
Ubiquitin-like domain-containing protein.
    
   0.862
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.