STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plpp6Phospholipid phosphatase 6. (286 aa)    
Predicted Functional Partners:
gpr182
G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.687
eef1aknmt
Methyltransferase like 13.
      
 0.568
edrf1
Erythroid differentiation regulatory factor 1.
      
 0.554
LOC110950738
SUN domain-containing protein.
      
 0.541
suco
SUN domain containing ossification factor.
      
 0.541
prrc2c
Proline-rich coiled-coil 2C.
      
 0.500
LOC110952505
Adrenoceptor alpha 2B.
      
 0.491
tm9sf4
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.490
pigc
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.468
pudp
Pseudouridine 5'-phosphatase.
      
 0.424
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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